Filtering unwanted checklists

Protocol used for filtering:

Removed Incomplete checklists Removed checklists Duration.Minutes less than 10m and more than 5hrs Removed Checklists Effort.Distance more than 10km
# Selecting wanted columns ## Protocol:
Keeping Locality ID, Sampling event identifier
# Selecting distinct rows ## Protocol Removing duplicates

baafiltered<- baa %>% 
  filter(ALL.SPECIES.REPORTED==1, EFFORT.DISTANCE.KM<10, DURATION.MINUTES<300, DURATION.MINUTES>10) %>% 
  select(baafiltered, SAMPLING.EVENT.IDENTIFIER, LOCALITY.ID)

Note: Using an external vector in selections is ambiguous.
[34mi[39m Use `all_of(baafiltered)` instead of `baafiltered` to silence this message.
[34mi[39m See <https://tidyselect.r-lib.org/reference/faq-external-vector.html>.
[90mThis message is displayed once per session.[39m
Error: Must subset columns with a valid subscript vector.
[31mx[39m Subscript has the wrong type `data.frame<
  GLOBAL.UNIQUE.IDENTIFIER    : factor<57920>
  LAST.EDITED.DATE            : factor<0a167>
  TAXONOMIC.ORDER             : integer
  CATEGORY                    : factor<84971>
  COMMON.NAME                 : factor<69a6e>
  SCIENTIFIC.NAME             : factor<489da>
  SUBSPECIES.COMMON.NAME      : factor<b1327>
  SUBSPECIES.SCIENTIFIC.NAME  : factor<a5cbe>
  OBSERVATION.COUNT           : factor<0694a>
  BREEDING.BIRD.ATLAS.CODE    : factor<32f7b>
  BREEDING.BIRD.ATLAS.CATEGORY: factor<adccb>
  AGE.SEX                     : factor<4b59a>
  COUNTRY                     : factor<117b9>
  COUNTRY.CODE                : factor<920e3>
  STATE                       : factor<2434f>
  STATE.CODE                  : factor<9c4ff>
  COUNTY                      : factor<57db4>
  COUNTY.CODE                 : factor<23362>
  IBA.CODE                    : logical
  BCR.CODE

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eBird and Fire

Filtering unwanted checklists

Protocol used for filtering:

Spacial Processing steps:

Read in fire shapefile

Map of shapefile

Convert ebird checklists to sf object with CRS code from fire shapefile

Make a map of the points using ggplot and geom_sf on the fire shapefile map

add column for inside/outside using st_join

make a map with points coloured by inside/outside

write out as rds to a directory called proceessed_data